Amanda Randles

  • Assistant Professor of Biomedical Engineering
  • Assistant Professor in the Department of Mechanical Engineering and Material Science (Secondary)
  • Assistant Professor of Computer Science (Secondary)
  • Assistant Professor of Mathematics (Secondary)
  • Member of the Duke Cancer Institute
External address: 301 Gross Hall, 140 Science Dr., Durham, NC 27708
Internal office address: Box 90984, Durham, NC 27708
Phone: (919) 660-5425

My research in biomedical simulation and high performance computing focuses on the development of new computational tools that we use to provide insight into the localization and development of human diseases ranging from atherosclerosis to cancer. 

Education & Training
  • Ph.D., Harvard University 2013

Randles, A, Baecher, M, Pfister, H, and Kaxiras, E. "A Lattice Boltzmann Simulation of Hemodynamics in a Patient-Specific Aortic Coarctation Model." Ed. O Camara, T Manso, M Pop, K Rhode, M Sermesant, and A Young. Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges: Third International Workshop, STACOM 2012, Held in Conjunction with MICCAI 2012, Nice, France, October 5, 2012, Revised Selected Papers (2013): 17-25. Full Text

Randles, AP. "Massively parallel model of evolutionary game dynamics." Proceedings - 2012 SC Companion: High Performance Computing, Networking Storage and Analysis, SCC 2012 (December 1, 2012): 1531-. Full Text

Randles, A, Baecher, M, Pfister, H, and Kaxiras, EK. "A Lattice Boltzmann Simulation of Hemodynamics in a Patient-Speci c Aortic Coarctation Model." Ed. O Camara, M Pop, T Mansi, M Sermesant, and A Young. Statistical Atlases and Computational Models of the Heart: Imaging and Modelling Challenges: 7746 (October 5, 2012): 17-25. Full Text

Borkin, MA, Gajos, KZ, Peters, A, Mitsouras, D, Melchionna, S, Rybicki, FJ, Feldman, CL, and Pfister, H. "Evaluation of artery visualizations for heart disease diagnosis." IEEE transactions on visualization and computer graphics 17.12 (December 2011): 2479-2488. Full Text

Robson, B, Li, J, Dettinger, R, Peters, A, and Boyer, SK. "Drug discovery using very large numbers of patents. General strategy with extensive use of match and edit operations." Journal of Computer-Aided Molecular Design 25.5 (May 2011): 427-441. Full Text

Jiang, K, Thorsen, O, Peters, A, Smith, B, and Sosa, CP. "An Efficient Parallel Implementation of the Hidden Markov Methods for Genomic Sequence-Search on a Massively Parallel System." IEEE Transactions on Parallel and Distributed Systems 19.1 (January 2008): 15-23. Full Text

Pang, Y-P, Mullins, TJ, Swartz, BA, McAllister, JS, Smith, BE, Archer, CJ, Musselman, RG, Peters, AE, Wallenfelt, BP, and Pinnow, KW. "EUDOC on the IBM Blue Gene/L system: Accelerating the transfer of drug discoveries from laboratory to patient." IBM Journal of Research and Development 52.1.2 (January 2008): 69-81. Full Text

Pages

Randles, A, Melchionna, S, Kaxiras, E, Latt, J, Sircar, J, Bernaschi, M, Bisson, M, and Succi, S. "Multiscale simulation of cardiovascular flows on the IBM Bluegene/P: full heart-circulation system at red-blood cell resolution." ACM/IEEE International Conference for High Performance Computing, Networking, Storage, and Analysis. November 13, 2010 - November 19, 2010. New Orleans, LA. ACM IEEE, November 2010.

Randles, A. "Parallel Genomic Sequence-Search on a Massively Parallel System." ACM International Conference on Computing Frontiers. May 7, 2007 - May 9, 2007. Ischia, Italy. ACM, May 2007.

Randles, A, Draeger, EW, and Michor, F. "Analysis of pressure gradient across aortic stenosis with massively parallel computational simulations." Computing in Cardiology. September 7, 2014 - September 10, 2014. Cambridge, MA.

Randles, A, and Kaxiras, EK. "A Spatio-Temporal Coupling Method to Reduce the Time-to-Solution of Cardiovascular Simulations." International Parallel and Distributed Processing Symposium. May 19, 2014 - May 23, 2014. Full Text

Randles, A. "MIC-SVM: Designing A Highly Efficient Support Vector Machine for Advanced Modern Multi-Core and Many-Core Architectures." IEEE International Parallel and Distributed Processing Symposium. May 19, 2014 - May 23, 2014. Full Text

Randles, A, King, A, Budnik, T, McCarthy, P, Michaud, P, Mundy, M, Sexton, J, and Stewart, G. "Asynchronous task dispatch for high throughput computing for the eServer IBM Blue Gene Supercomputer." IEEE International Symposium on Parallel and Distributed Processing. April 14, 2008 - April 18, 2008. Miami, FL. Full Text

Pages